miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|240372287|gb|GR357319.1|GR357319 CGCCCAACATGGTAACGATCGTTCTCGCGTTCCAACCCGCCGGGTTTCCTCTCCTCTCCGGGATCTGACACCCTTCCATC
CGATTTTGGCTGGCCCCTTTGCAGATCCGGTTCATCTTGCTGCAAAACCGGCAGGGAAAGACGCGGCTGGCCAAGTACTA
CGTCCCGCTCGAGGACTCGGAGAAGCACAAGGTCGAGTACGAGGTGCATCGGCTGGTTGTCAACAGGGACCCCAAGTTCA
CCAACTTCGTTGAGGTGATTGAATTCTTTAATTGGAATTAAGTACGAGGGATTTGTACTATACGCGTGGGCGAAATTAGC
AAAGGGATCGTTGCTTCTTGCTTGGTTTTAGAATTGAACAGGGCTCCGTGTTCTTGATCTGGAGACTGATCATAGGGTAG
AAATAGAATGAGTTCAAACAACGTACTCCCTCCGTCTCAAAATTGATGTCGCAGATTTGTCAAAATTTGGATGAATCTAT
ATACTATTTGAGCCAGAGGGAGTAGTTGTGGATACTGTTGTTCTTGGTTGACTTCTACATGGAATCGTAGTTGTGAAAGG
TTGTGCCCTTTGTCCTGGCCGTCCAGTGGTTAGAGGTAATTATGCAAACATCTACATGACTGTTATTGGAAGTTGATCTG
TG




Most similar to sp|O50016|AP2S1_MAIZE

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|O50016|AP2S1_MAIZE AP-2 complex subunit sigma-1 OS=Zea mays
           GN=AP-17 PE=2 SV=1
          Length = 132

 Score =  104 bits (260), Expect = 4e-22
 Identities = 50/50 (100%), Positives = 50/50 (100%)
 Frame = +3

Query: 105 IRFILLQNRQGKTRLAKYYVPLEDSEKHKVEYEVHRLVVNRDPKFTNFVE 254
           IRFILLQNRQGKTRLAKYYVPLEDSEKHKVEYEVHRLVVNRDPKFTNFVE
Sbjct: 2   IRFILLQNRQGKTRLAKYYVPLEDSEKHKVEYEVHRLVVNRDPKFTNFVE 51